Aether Supplementary Materials
نویسندگان
چکیده
Figure 1: Overview of the assembly process. A total of 1572 fecal samples were collected and sequenced at various timepoints during the first 3 years of 379 individuals lives. These were assembled with MEGAHIT into 68,181,571 contigs. Across all samples, a total of 62,257,853 genes, 1,000,000 of which were unique, were then annotated using Prokka. Only contigs that were over 1000 bases long were used. The mean length of this group was 4278 bases.
منابع مشابه
Aether: Leveraging Linear Programming For Optimal Cloud Computing In Genomics.
Motivation Across biology we are seeing rapid developments in scale of data production without a corresponding increase in data analysis capabilities. Results Here, we present Aether (http://aether.kosticlab.org), an intuitive, easy-to-use, cost-effective, and scalable framework that uses linear programming (LP) to optimally bid on and deploy combinations of underutilized cloud computing reso...
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